The objective of FTP based S&F is to collect and download the remote time stamped RTU datalogs into the SCADA Tag Historain . This can be accomplished in 2 ways.
Run jython script on Ignition and download as explained above.
Import the csv files directly into the database like MySQL / PostgreSQL etc.
I haven't tested option 1 yet. Personally, i prefer option 2, because MySQL takes care of rejecting duplicate tags automatically and it's very fast. When you automate this process, your script must select the latest table partition and import.